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Registro completo
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Biblioteca (s) : |
INIA Treinta y Tres. |
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Fecha : |
12/09/2014 |
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Actualizado : |
08/10/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
FITZGERALD, M.A.; BERGMAN, C.J.; RESURRECCION, A.P.; MOLLER, J.; JIMENEZ, R.; REINKE, R.F.; MARTIN, M.; BLANCO, P.; MOLINA, F.; CHEN, M.-H.; KURI, V.; ROMERO, M.V.; HABIBI, F.; UMEMOTO, T.; JONGDEE, S.; GRATEROL, E.; REDDY, K.R.; BASSINELLO, P.Z.; SIVAKAMI, R.; RANI, N.S.; DAS, S.; WANG, Y.J.; INDRASARI, S.D.; RAMLI, A.; AHMAD, R.; DIPTI, S.S.; XIE, L.; LANG, N.T.; SINGH, P.; PORO, D.C.; TAVASOLI, F.; MESTRES, C. |
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Afiliación : |
BLANCO BARRAL, PEDRO HORACIO, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay; MOLINA CASELLA, FEDERICO, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay. |
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Título : |
Addressing the dilemmas of measuring amylose in rice. |
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Fecha de publicación : |
2009 |
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Fuente / Imprenta : |
Cereal Chemistry, 2009, v. 86, no. 5, p. 492-498. |
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ISSN : |
0009-0352 |
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DOI : |
10.1094/CCHEM-86-5-0492 |
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Idioma : |
Inglés |
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Contenido : |
Amylose content is a parameter that correlates with the cooking behavior of rice. It is measured at the earliest possible stages of rice improvement programs to enable breeders to build the foundations of appropriate grain quality during cultivar development. Amylose is usually quantified by absorbance of the amylose-iodine complex. The International Network for Quality Rice (INQR) conducted a survey to determine ways that amylose is measured, reproducibility between laboratories, and sources of variation. Each laboratory measured the amylose content of a set of 17 cultivars of rice. The study shows that five different versions of the iodine binding method are in use. The data show that repeatability was high within laboratories but reproducibility between laboratories was low. The major sources of variability were the way the standard curve was constructed and the iodine binding capacity of the potato amylose used to produce the standard. Reproducibility is much lower between laboratories using a standard curve of potato amylose alone compared with those using calibrated rice cultivars. This study highlights the need to standardize the way amylose is measured, and presents research avenues for doing so. |
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Thesagro : |
AMILOSA; ARROZ; CALIDAD CULINARIA. |
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Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
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Marc : |
LEADER 02591naa a2200553 a 4500
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008 2009 bl uuuu u00u1 u #d
022 $a0009-0352
024 7 $a10.1094/CCHEM-86-5-0492$2DOI
100 1 $aFITZGERALD, M.A.
245 $aAddressing the dilemmas of measuring amylose in rice.$h[electronic resource]
260 $c2009
520 $aAmylose content is a parameter that correlates with the cooking behavior of rice. It is measured at the earliest possible stages of rice improvement programs to enable breeders to build the foundations of appropriate grain quality during cultivar development. Amylose is usually quantified by absorbance of the amylose-iodine complex. The International Network for Quality Rice (INQR) conducted a survey to determine ways that amylose is measured, reproducibility between laboratories, and sources of variation. Each laboratory measured the amylose content of a set of 17 cultivars of rice. The study shows that five different versions of the iodine binding method are in use. The data show that repeatability was high within laboratories but reproducibility between laboratories was low. The major sources of variability were the way the standard curve was constructed and the iodine binding capacity of the potato amylose used to produce the standard. Reproducibility is much lower between laboratories using a standard curve of potato amylose alone compared with those using calibrated rice cultivars. This study highlights the need to standardize the way amylose is measured, and presents research avenues for doing so.
650 $aAMILOSA
650 $aARROZ
650 $aCALIDAD CULINARIA
700 1 $aBERGMAN, C.J.
700 1 $aRESURRECCION, A.P.
700 1 $aMOLLER, J.
700 1 $aJIMENEZ, R.
700 1 $aREINKE, R.F.
700 1 $aMARTIN, M.
700 1 $aBLANCO, P.
700 1 $aMOLINA, F.
700 1 $aCHEN, M.-H.
700 1 $aKURI, V.
700 1 $aROMERO, M.V.
700 1 $aHABIBI, F.
700 1 $aUMEMOTO, T.
700 1 $aJONGDEE, S.
700 1 $aGRATEROL, E.
700 1 $aREDDY, K.R.
700 1 $aBASSINELLO, P.Z.
700 1 $aSIVAKAMI, R.
700 1 $aRANI, N.S.
700 1 $aDAS, S.
700 1 $aWANG, Y.J.
700 1 $aINDRASARI, S.D.
700 1 $aRAMLI, A.
700 1 $aAHMAD, R.
700 1 $aDIPTI, S.S.
700 1 $aXIE, L.
700 1 $aLANG, N.T.
700 1 $aSINGH, P.
700 1 $aPORO, D.C.
700 1 $aTAVASOLI, F.
700 1 $aMESTRES, C.
773 $tCereal Chemistry, 2009$gv. 86, no. 5, p. 492-498.
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Registro original : |
INIA Treinta y Tres (TT) |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha actual : |
25/05/2023 |
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Actualizado : |
25/05/2023 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
GARAYCOCHEA, S.; ALTIER, N.; LEONI, C.; NEAL, A.L.; ROMERO, H. |
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Afiliación : |
SILVIA RAQUEL GARAYCOCHEA SOLSONA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; NORA ADRIANA ALTIER MANZINI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; CAROLINA LEONI VELAZCO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ANDREW L. NEAL, Net-Zero and Resilient Farming, Rothamsted Research, North Wyke, Okehampton, United Kingdom; HÉCTOR ROMERO, Laboratorio de Organización y Evolución del Genoma/Genómica Evolutiva, Departamento de Ecolog??a y Evolución, Facultad de Ciencias/CURE, Universidad de la República, Maldonado, Uruguay. |
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Título : |
Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils. |
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Complemento del título : |
Research article. |
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Fecha de publicación : |
2023 |
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Fuente / Imprenta : |
Environmental Microbiology Reports, 2023. https://doi.org/10.1111/1758-2229.13159 --OPEN ACCESS. [Article in Press] |
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ISSN : |
1758-2229 |
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DOI : |
10.1111/1758-2229.13159 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 28 December 2022; Accepted 12 April 2023. -- Correspondence: Héctor Romero, Laboratorio de Organización y Evolución del Genoma/Genómica Evolutiva, Departamento de Ecología y Evolución, Facultad de Ciencias/CURE, Universidad de la República, Maldonado, Uruguay. Email: eletor@fcien.edu.uy ; Silvia Garaycochea, Instituto Nacional de Investigacion Agropecuaria (INIA), Estación Experimental INIA Las Brujas, Ruta 48 Km 10, Canelones, 90200, Uruguay. Email: sgaraycochea@inia.org.uy -- Funding: This work was funded by the Instituto Nacional de Investigación Agropecuaria, INIA (Project SA47, SA 26 and SA 24), Agencia Nacional de Investigación e Innovación (POS NAC 2015 1 110075). -- License: This is an open access article under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ ) -- Supporting information: Additional supporting information can be found online
in the Supporting Information section at the end of this article. |
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Contenido : |
Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset's most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them. © 2023 The Authors. Environmental Microbiology Reports published by Applied Microbiology International and John Wiley & Sons Ltd. |
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Palabras claves : |
Biomass; Biomes; Ecosystem; Grasslands; Statistical analyses. |
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Asunto categoría : |
P01 Conservación de la naturaleza y recursos de La tierra |
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URL : |
https://ami-journals.onlinelibrary.wiley.com/doi/pdf/10.1111/1758-2229.13159
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Marc : |
LEADER 03302naa a2200265 a 4500
001 1064166
005 2023-05-25
008 2023 bl uuuu u00u1 u #d
022 $a1758-2229
024 7 $a10.1111/1758-2229.13159$2DOI
100 1 $aGARAYCOCHEA, S.
245 $aAbundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils.$h[electronic resource]
260 $c2023
500 $aArticle history: Received 28 December 2022; Accepted 12 April 2023. -- Correspondence: Héctor Romero, Laboratorio de Organización y Evolución del Genoma/Genómica Evolutiva, Departamento de Ecología y Evolución, Facultad de Ciencias/CURE, Universidad de la República, Maldonado, Uruguay. Email: eletor@fcien.edu.uy ; Silvia Garaycochea, Instituto Nacional de Investigacion Agropecuaria (INIA), Estación Experimental INIA Las Brujas, Ruta 48 Km 10, Canelones, 90200, Uruguay. Email: sgaraycochea@inia.org.uy -- Funding: This work was funded by the Instituto Nacional de Investigación Agropecuaria, INIA (Project SA47, SA 26 and SA 24), Agencia Nacional de Investigación e Innovación (POS NAC 2015 1 110075). -- License: This is an open access article under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ ) -- Supporting information: Additional supporting information can be found online in the Supporting Information section at the end of this article.
520 $aGrassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset's most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them. © 2023 The Authors. Environmental Microbiology Reports published by Applied Microbiology International and John Wiley & Sons Ltd.
653 $aBiomass
653 $aBiomes
653 $aEcosystem
653 $aGrasslands
653 $aStatistical analyses
700 1 $aALTIER, N.
700 1 $aLEONI, C.
700 1 $aNEAL, A.L.
700 1 $aROMERO, H.
773 $tEnvironmental Microbiology Reports, 2023. https://doi.org/10.1111/1758-2229.13159 --OPEN ACCESS. [Article in Press]
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